Journal Article Epublish
PubMed: 40430018 DOI: 10.3390/ijms26104876
Identification of Cancer Associated Fibroblasts Related Genes Signature to Facilitate Improved Prediction of Prognosis and Responses to Therapy in Patients with Pancreatic Cancer.
Int J Mol Sci 26(10)
Authors: Yong Zhou, Yanxi Lu, Franziska Czubayko, Jisheng Chen, Shuwen Zheng, Huaqing Mo, Rui Liu, Georg F Weber, Robert Grützmann, Christian Pilarsky, Paul David
Affiliations
- Department of Surgery, University Hospital Erlangen, Friedrich-Alexander Universität Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany.
- Deutsches Zentrum für Immuntherapie, Universitätsklinikum Erlangen, Friedrich-Alexander Universität Erlangen-Nürnberg (FAU), 91054 Erlangen, Germany.
- Bavarian Cancer Research Center (BZKF), 91052 Erlangen, Germany.
Abstract
Pancreatic cancer (PC) is highly aggressive, with a 5-year survival rate of 12.8%, making early detection vital. However, non-specific symptoms and precursor lesions complicate diagnosis. Existing tools for the early detection of PC are limited. CAFs are crucial in cancer progression, invasion, and metastasis, yet their role in PC is poorly understood. This study analyzes mRNA data from PC samples to identify CAF-related genes and drugs for PC treatment using algorithms like EPIC, xCell, MCP-counter, and TIDE to quantify CAF infiltration. Weighted gene co-expression network analysis (WGCNA) identified 26 hub genes. Our analyses revealed eight prognostic genes, leading to establishing a six-gene model for assessing prognosis. Correlation analysis showed that the CAF risk score correlates with CAF infiltration and related markers. We also identified six potential drugs, observing significant differences between high-CAF and low-CAF risk groups. High CAF risk scores were associated with lower responses to immunotherapy and higher tumor mutation burdens. GSEA indicated that these scores are enriched in tumor microenvironment pathways. In summary, these six model genes can predict overall survival and responses to chemotherapy and immunotherapy for pancreatic cancer, offering valuable insights for future clinical strategies.
MeSH
Genes, Pancreatic Neoplasms, Pharmaceutical Preparations, Neoplasms, Drug Therapy, Immunotherapy, Cancer-Associated Fibroblasts, Fibroblasts, Therapeutics, Prognosis, Chemotherapy